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archivo de registro no encontrado bibtex

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archivo de registro no encontrado bibtex

Al intentar compilar mi archivo bibtex, solo aparecen y se numeran ciertas referencias. muchos otros, sin embargo, no lo hacen, y cuando uso el comando bibtex, aparece el mensaje "Error: ¡archivo de registro no encontrado!". He usado \cite{} en todas las referencias, donde algunas aparecen como un signo de interrogación aunque existan en el archivo bib.

Por favor vea mi archivo .bib

@article{cargill1999characterization,
  title={Characterization of single-nucleotide polymorphisms in coding regions of human genes},
  author={Cargill, Michele and Altshuler, David and Ireland, James and Sklar, Pamela and Ardlie, Kristin and Patil, Nila and Lane, Charles R and Lim, Esther P and Kalyanaraman, Nilesh and Nemesh, James and others},
  journal={Nature genetics},
  volume={22},
  number={3},
  pages={231--238},
  year={1999},
  publisher={Nature Publishing Group}
}

@article{collins1998dna,
  title={A DNA polymorphism discovery resource for research on human genetic variation},
  author={Collins, Francis S and Brooks, Lisa D and Chakravarti, Aravinda},
  journal={Genome research},
  volume={8},
  number={12},
  pages={1229--1231},
  year={1998},
  publisher={Cold Spring Harbor Lab}
}

@article{frazer2009human,
  title={Human genetic variation and its contribution to complex traits},
  author={Frazer, Kelly A and Murray, Sarah S and Schork, Nicholas J and Topol, Eric J},
  journal={Nature Reviews Genetics},
  volume={10},
  number={4},
  pages={241--251},
  year={2009},
  publisher={Nature Publishing Group}
}

@article{10002010map,
  title={A map of human genome variation from population-scale sequencing},
  author={1000 Genomes Project Consortium and others},
  journal={Nature},
  volume={467},
  number={7319},
  pages={1061--1073},
  year={2010},
  publisher={Nature Publishing Group}
}

@article{smigielski2000dbsnp,
  title={dbSNP: a database of single nucleotide polymorphisms},
  author={Smigielski, Elizabeth M and Sirotkin, Karl and Ward, Minghong and Sherry, Stephen T},
  journal={Nucleic Acids Research},
  volume={28},
  number={1},
  pages={352--355},
  year={2000},
  publisher={Oxford Univ Press}
}

@article{fredman2002hgvbase,
  title={HGVbase: a human sequence variation database emphasizing data quality and a broad spectrum of data sources},
  author={Fredman, D and Siegfried, Marianne and Yuan, Yan P. and Bork, Peer and Lehv{\"a}slaiho, Heikki and Brookes, Anthony J},
  journal={Nucleic acids research},
  volume={30},
  number={1},
  pages={387--391},
  year={2002},
  publisher={Oxford Univ Press}
}

@article{hamosh2005online,
  title={Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders},
  author={Hamosh, Ada and Scott, Alan F and Amberger, Joanna S and Bocchini, Carol A and McKusick, Victor A},
  journal={Nucleic acids research},
  volume={33},
  number={suppl 1},
  pages={D514--D517},
  year={2005},
  publisher={Oxford Univ Press}
}

@article{becker2004genetic,
  title={The genetic association database},
  author={Becker, Kevin G and Barnes, Kathleen C and Bright, Tiffani J and Wang, S Alex},
  journal={Nature genetics},
  volume={36},
  number={5},
  pages={431--432},
  year={2004},
  publisher={Nature Publishing Group}
}

@article{cooper1998human,
  title={The human gene mutation database},
  author={Cooper, David N and Ball, Edward V and Krawczak, Michael},
  journal={Nucleic acids research},
  volume={26},
  number={1},
  pages={285--287},
  year={1998},
  publisher={Oxford Univ Press}
}

@article{karolchik2003ucsc,
  title={The UCSC genome browser database},
  author={Karolchik, Donna and Baertsch, Robert and Diekhans, Mark and Furey, Terrence S. and Hinrichs, A and Lu, YT and Roskin, Krishna M. and Schwartz, M and Sugnet, Charles W. and Thomas, Daryl J and others},
  journal={Nucleic acids research},
  volume={31},
  number={1},
  pages={51--54},
  year={2003},
  publisher={Oxford Univ Press}
}

@article{adzhubei2010method,
  title={A method and server for predicting damaging missense mutations},
  author={Adzhubei, Ivan A and Schmidt, Steffen and Peshkin, Leonid and Ramensky, Vasily E and Gerasimova, Anna and Bork, Peer and Kondrashov, Alexey S and Sunyaev, Shamil R},
  journal={Nature methods},
  volume={7},
  number={4},
  pages={248--249},
  year={2010},
  publisher={Nature Publishing Group}
}

@article{ng2003sift,
  title={SIFT: Predicting amino acid changes that affect protein function},
  author={Ng, Pauline C and Henikoff, Steven},
  journal={Nucleic acids research},
  volume={31},
  number={13},
  pages={3812--3814},
  year={2003},
  publisher={Oxford Univ Press}
}

@article{kumar2012evolutionary,
  title={Evolutionary diagnosis method for variants in personal exomes},
  author={Kumar, Sudhir and Sanderford, Maxwell and Gray, Vanessa E and Ye, Jieping and Liu, Li},
  journal={Nature methods},
  volume={9},
  number={9},
  pages={855--856},
  year={2012},
  publisher={Nature Publishing Group}
}

@article{hicks2011prediction,
  title={Prediction of missense mutation functionality depends on both the algorithm and sequence alignment employed},
  author={Hicks, Stephanie and Wheeler, David A and Plon, Sharon E and Kimmel, Marek},
  journal={Human mutation},
  volume={32},
  number={6},
  pages={661--668},
  year={2011},
  publisher={Wiley Online Library}
}

@article{lopes2012combined,
  title={A combined functional annotation score for non-synonymous variants},
  author={Lopes, Margarida C and Joyce, Chris and Ritchie, Graham RS and John, Sally L and Cunningham, Fiona and Asimit, Jennifer and Zeggini, Eleftheria},
  journal={Human heredity},
  volume={73},
  number={1},
  pages={47--51},
  year={2012},
  publisher={Karger Publishers}
}

@article{capriotti2011improving,
  title={Improving the prediction of disease-related variants using protein three-dimensional structure},
  author={Capriotti, Emidio and Altman, Russ B},
  journal={BMC bioinformatics},
  volume={12},
  number={Suppl 4},
  pages={S3},
  year={2011},
  publisher={BioMed Central Ltd}
}

@article{bromberg2007snap,
  title={SNAP: predict effect of non-synonymous polymorphisms on function},
  author={Bromberg, Yana and Rost, Burkhard},
  journal={Nucleic acids research},
  volume={35},
  number={11},
  pages={3823--3835},
  year={2007},
  publisher={Oxford Univ Press}
}

@article{bromberg2007snap,
  title={SNAP: predict effect of non-synonymous polymorphisms on function},
  author={Bromberg, Yana and Rost, Burkhard},
  journal={Nucleic acids research},
  volume={35},
  number={11},
  pages={3823--3835},
  year={2007},
  publisher={Oxford Univ Press}
}

@article{collins2001implications,
  title={Implications of the Human Genome Project for medical science},
  author={Collins, Francis S and McKusick, Victor A},
  journal={Jama},
  volume={285},
  number={5},
  pages={540--544},
  year={2001},
  publisher={American Medical Association}
}

@article{lyons2009sail,
  title={The SAIL databank: linking multiple health and social care datasets},
  author={Lyons, Ronan A and Jones, Kerina H and John, Gareth and Brooks, Caroline J and Verplancke, Jean-Philippe and Ford, David V and Brown, Ginevra and Leake, Ken},
  journal={BMC Medical Informatics and Decision Making},
  volume={9},
  number={1},
  pages={3},
  year={2009},
  publisher={BioMed Central Ltd}
}

@article{guttmacher2002genomic,
  title={Genomic medicine—a primer},
  author={Guttmacher, Alan E and Collins, Francis S and Guttmacher, Alan E and Collins, Francis S},
  journal={New England Journal of Medicine},
  volume={347},
  number={19},
  pages={1512--1520},
  year={2002},
  publisher={Mass Medical Soc}
}

@article{green2011charting,
  title={Charting a course for genomic medicine from base pairs to bedside},
  author={Green, Eric D and Guyer, Mark S and Institute, National Human Genome Research and others},
  journal={Nature},
  volume={470},
  number={7333},
  pages={204--213},
  year={2011},
  publisher={Nature Publishing Group}
}

@article{ginsburg2001personalized,
  title={Personalized medicine: revolutionizing drug discovery and patient care},
  author={Ginsburg, Geoffrey S and McCarthy, Jeanette J},
  journal={TRENDS in Biotechnology},
  volume={19},
  number={12},
  pages={491--496},
  year={2001},
  publisher={Elsevier}
}

@article{kho2013practical,
  title={Practical challenges in integrating genomic data into the electronic health record},
  author={Kho, Abel N and Rasmussen, Luke V and Connolly, John J and Peissig, Peggy L and Starren, Justin and Hakonarson, Hakon and Hayes, M Geoffrey},
  journal={Genetics in Medicine},
  volume={15},
  number={10},
  pages={772--778},
  year={2013},
  publisher={Nature Publishing Group}
}

@article{martin2002lntegratingfienomics,
  title={lntegratingfienomics into Health Information Systems},
  author={Martin-Sanchez, F and Mooio, V and Lopez-CamposI, G},
  journal={Methods Inf Med},
  volume={4},
  pages={25--30},
  year={2002}
}

@article{decode,
  title={deCODE: A Genealogical Approach to Human Genetics in Iceland},
  author={Jeffrey R Gulcher, Kari Stefansson},
  year={2006},
  publisher={Wiley}
}

@article{roden2008development,
  title={Development of a large-scale de-identified DNA biobank to enable personalized medicine},
  author={Roden, Dan M and Pulley, Jill M and Basford, Melissa A and Bernard, Gordon R and Clayton, Ellen W and Balser, Jeffrey R and Masys, Dan R},
  journal={Clinical Pharmacology \& Therapeutics},
  volume={84},
  number={3},
  pages={362--369},
  year={2008},
  publisher={Nature Publishing Group}
}

@article{kullo2010genome,
  title={A genome-wide association study of red blood cell traits using the electronic medical record},
  author={Kullo, Iftikhar J and Ding, Keyue and Jouni, Hayan and Smith, Carin Y and Chute, Christopher G},
  journal={PLoS One},
  volume={5},
  number={9},
  pages={e13011},
  year={2010},
  publisher={Public Library of Science}
}

@article{siva20081000,
  title={1000 Genomes project},
  author={Siva, Nayanah},
  journal={Nature biotechnology},
  volume={26},
  number={3},
  pages={256--256},
  year={2008},
  publisher={Nature Publishing Group}
}

@article{gibbs2003international,
  title={The international HapMap project},
  author={Gibbs, Richard A and Belmont, John W and Hardenbol, Paul and Willis, Thomas D and Yu, Fuli and Yang, Huanming and Ch'ang, Lan-Yang and Huang, Wei and Liu, Bin and Shen, Yan and others},
  journal={Nature},
  volume={426},
  number={6968},
  pages={789--796},
  year={2003},
  publisher={Nature Publishing Group}
}

@article{mailman2007ncbi,
  title={The NCBI dbGaP database of genotypes and phenotypes},
  author={Mailman, Matthew D and Feolo, Michael and Jin, Yumi and Kimura, Masato and Tryka, Kimberly and Bagoutdinov, Rinat and Hao, Luning and Kiang, Anne and Paschall, Justin and Phan, Lon and others},
  journal={Nature genetics},
  volume={39},
  number={10},
  pages={1181--1186},
  year={2007},
  publisher={Nature Publishing Group}
}

@article{meigs2007genome,
  title={Genome-wide association with diabetes-related traits in the Framingham Heart Study},
  author={Meigs, James B and Manning, Alisa K and Fox, Caroline S and Florez, Jose C and Liu, Chunyu and Cupples, L Adrienne and Dupuis, Jos{\'e}e},
  journal={BMC medical genetics},
  volume={8},
  number={Suppl 1},
  pages={S16},
  year={2007},
  publisher={BioMed Central Ltd}
}

@article{wong2012prediction,
  title={Prediction of susceptibility to major depression by a model of interactions of multiple functional genetic variants and environmental factors},
  author={Wong, ML and Dong, C and Andreev, V and Arcos-Burgos, M and Licinio, J},
  journal={Molecular psychiatry},
  volume={17},
  number={6},
  pages={624--633},
  year={2012},
  publisher={Nature Publishing Group}
}

@article{yucebacs2014prostate,
  title={A prostate cancer model build by a novel SVM-ID3 hybrid feature selection method using both genotyping and phenotype data from dbGaP},
  author={Y{\"u}ceba{\c{s}}, Sait Can and Son, Ye{\c{s}}im Ayd{\i}n},
  journal={PloS one},
  volume={9},
  number={3},
  pages={e91404},
  year={2014},
  publisher={Public Library of Science}
}

@article{cheadle1993direct,
  title={Direct sequencing of the complete CFTR gene: the molecular characterisation of 99.5\% of CF chromosomes in Wales},
  author={Cheadle, Jeremy P and Goodchild, Mary C and Meredith, Alison L},
  journal={Human molecular genetics},
  volume={2},
  number={10},
  pages={1551--1556},
  year={1993},
  publisher={Oxford Univ Press}
}

@article{lancaster1998brca1,
  title={BRCA1 and BRCA2 in breast cancer families from Wales: moderate mutation frequency and two recurrent mutations in BRCA1.},
  author={Lancaster, JM and Carney, ME and Gray, J and Myring, J and Gumbs, C and Sampson, J and Wheeler, D and France, E and Wiseman, R and Harper, P and others},
  journal={British journal of cancer},
  volume={78},
  number={11},
  pages={1417},
  year={1998},
  publisher={Nature Publishing Group}
}

@article{haralambos20121,
  title={(1) Genetic testing for familial hypercholesterolaemia in wales: identification of recurrent and novel variants},
  author={Haralambos, K and Whatley, S and Datta, D and McDowell, I},
  journal={Atherosclerosis},
  volume={223},
  number={2},
  pages={528},
  year={2012},
  publisher={Elsevier}
}

@article{liu2011dbnsfp,
  title={dbNSFP: a lightweight database of human nonsynonymous SNPs and their functional predictions},
  author={Liu, Xiaoming and Jian, Xueqiu and Boerwinkle, Eric},
  journal={Human mutation},
  volume={32},
  number={8},
  pages={894--899},
  year={2011},
  publisher={Wiley Online Library}
}

@article{schwarz2010mutationtaster,
  title={MutationTaster evaluates disease-causing potential of sequence alterations},
  author={Schwarz, Jana Marie and R{\"o}delsperger, Christian and Schuelke, Markus and Seelow, Dominik},
  journal={Nature methods},
  volume={7},
  number={8},
  pages={575--576},
  year={2010},
  publisher={Nature Publishing Group}
}

@article{wang2010annovar,
  title={ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data},
  author={Wang, Kai and Li, Mingyao and Hakonarson, Hakon},
  journal={Nucleic acids research},
  volume={38},
  number={16},
  pages={e164--e164},
  year={2010},
  publisher={Oxford Univ Press}
}

@article{altschul1997gapped,
  title={Gapped BLAST and PSI-BLAST: a new generation of protein database search programs},
  author={Altschul, Stephen F and Madden, Thomas L and Sch{\"a}ffer, Alejandro A and Zhang, Jinghui and Zhang, Zheng and Miller, Webb and Lipman, David J},
  journal={Nucleic acids research},
  volume={25},
  number={17},
  pages={3389--3402},
  year={1997},
  publisher={Oxford Univ Press}
}

@article{joosten2011series,
  title={A series of PDB related databases for everyday needs},
  author={Joosten, Robbie P and Te Beek, Tim AH and Krieger, Elmar and Hekkelman, Maarten L and Hooft, Rob WW and Schneider, Reinhard and Sander, Chris and Vriend, Gert},
  journal={Nucleic acids research},
  volume={39},
  number={suppl 1},
  pages={D411--D419},
  year={2011},
  publisher={Oxford Univ Press}
}

@article{berman2000protein,
  title={The protein data bank},
  author={Berman, Helen M and Westbrook, John and Feng, Zukang and Gilliland, Gary and Bhat, TN and Weissig, Helge and Shindyalov, Ilya N and Bourne, Philip E},
  journal={Nucleic acids research},
  volume={28},
  number={1},
  pages={235--242},
  year={2000},
  publisher={Oxford Univ Press}
}

@article{chapman2000biopython,
  title={Biopython: Python tools for computational biology},
  author={Chapman, Brad and Chang, Jeffrey},
  journal={ACM SIGBIO Newsletter},
  volume={20},
  number={2},
  pages={15--19},
  year={2000},
  publisher={ACM}
}

@article{pickrell2014epilepsy,
  title={EPILEPSY PREVALENCE, INCIDENCE AND SOCIOECONOMIC DEPRIVATION},
  author={Pickrell, Owen and Lacey, Arron and Bodger, Owen and Demmler, Joanne and Thomas, Rhys and Lyons, Ronan and Smith, Phil and Rees, Mark and Kerr, Mike},
  journal={Journal of Neurology, Neurosurgery \& Psychiatry},
  volume={85},
  number={10},
  pages={e4--e4},
  year={2014},
  publisher={BMJ Publishing Group Ltd}
}

@article{pickrell2014trends,
  title={Trends in the first antiepileptic drug prescribed for epilepsy between 2000 and 2010},
  author={Pickrell, W Owen and Lacey, Arron S and Thomas, Rhys H and Lyons, Ronan A and Smith, Phil EM and Rees, Mark I},
  journal={Seizure},
  volume={23},
  number={1},
  pages={77--80},
  year={2014},
  publisher={Elsevier}
}

@article{pickrell2012weight,
  title={Weight change associated with antiepileptic drugs},
  author={Pickrell, William Owen and Lacey, Arron S and Thomas, Rhys H and Smith, Philip EM and Rees, Mark I},
  journal={Journal of Neurology, Neurosurgery \& Psychiatry},
  pages={jnnp--2012},
  year={2012},
  publisher={BMJ Publishing Group Ltd}
}

¿Alguien puede ver algo malo? Como dije, algunas referencias funcionan (altschul1997gapped), por ejemplo.

Respuesta1

No puedo replicar el error que informa haber recibido. Sin embargo, noté bastantes problemas en su archivo de bibliografía que deberían solucionarse.

  • Lo más importante es que en el titlecampo hay que cuidarse.nopara permitir que BibTeX escriba en minúsculas las palabras que no deberían estar en minúsculas. Entre ellos se encuentran palabras como Wales(el país) y acrónimos ( DNA, HGVbase).

  • Algunos autores son "autores corporativos", por ejemplo,

    author={1000 Genomes Project Consortium and others},

    Si no tiene cuidado, BibTeX interpretará que el primer autor tiene los nombres "1000", "Genomas" y "Proyecto" y el apellido "Consorcio" (¡y por lo tanto se clasificará en C para Consorcio!). ¡¡Ay!! Debes escribir este campo de autor como

    author={{1000 Genomes Project Consortium} and others}

    es decir, incluya el nombre completo del primer autor entre un par adicional de llaves. Del mismo modo, es necesario escribir

    author={Green, Eric D and Guyer, Mark S and {National Human Genome Research Institute} and others},

  • Tenga cuidado de utilizar sólo la palabra clave andpero sin comas para separar a los autores. En la entrada con clave decode, actualmente tienes

    author={Jeffrey R Gulcher, Kari Stefansson},

    Según las reglas de sintaxis de BibTeX, esta entrada se interpretará como si tuviera unasolteroautor con un apellido de tres palabras ("Jeffrey R Gulcher") y dos nombres: "Kari" y "Stefansson"; por lo tanto, también se ordenará bajo "J" de "Jeffrey" en lugar de bajo "G" de "Gulcher". Creo que este campo debería ser

    author={Jeffrey R Gulcher and Kari Stefansson},

  • Estás haciendo un muy buen trabajo ingresando caracteres acentuados, pero hay algunos otros caracteres que no son ASCII de 7 bits presentes en la bilis del babero. Por ejemplo, debe reemplazar —con ---para obtener un guión em.

  • No tiene sentido tener entradas duplicadas, ¿verdad? Por lo tanto, elimine la segunda instancia de la entrada con la clave bromberg2007snap".

  • Opcional (y no implementado en el código siguiente): También agregaría puntos ("puntos") al final de los nombres de pila abreviados, es decir, escribiría Collins, Francis S. and Brooks, Lisa D.en lugar de Collins, Francis S and Brooks, Lisa D. Si el estilo de bibliografía que utiliza elimina los puntos, está bien. Sin embargo, no conozco ningún archivo de estilo babero queagregarlos períodos automáticamente si faltan.

  • En algún lugar entre opcional y obligatorio, pero ciertamente bastante deseable (y tampoco implementado en el código siguiente): debe intentar mantener la información sobre los nombres de los autores coherente en todas las entradas. Por ejemplo, tiene las siguientes dos entradas:

    @article{pickrell2014epilepsy,
  ...,
  author={Pickrell, Owen and Lacey, Arron and Bodger, Owen and Demmler, Joanne and Thomas, Rhys and Lyons, Ronan and Smith, Phil and Rees, Mark and Kerr, Mike},
  ...,
}

@article{pickrell2014trends,
  ...,
  author={Pickrell, W Owen and Lacey, Arron S and Thomas, Rhys H and Lyons, Ronan A and Smith, Phil EM and Rees, Mark I},
  ...,
}

    La última entrada proporciona las iniciales del segundo nombre de todos los autores, mientras que la primera no. Sólo para evitar cualquier confusión sobre si estos autores son los mismos, debe proporcionar la información que falta en la entrada anterior.

\documentclass{article}
\usepackage{filecontents}
\begin{filecontents}{\jobname.bib}

@article{cargill1999characterization,
  title={Characterization of single-nucleotide polymorphisms in coding regions of human genes},
  author={Cargill, Michele and Altshuler, David and Ireland, James and Sklar, Pamela and Ardlie, Kristin and Patil, Nila and Lane, Charles R and Lim, Esther P and Kalyanaraman, Nilesh and Nemesh, James and others},
  journal={Nature genetics},
  volume={22},
  number={3},
  pages={231--238},
  year={1999},
  publisher={Nature Publishing Group}
}

@article{collins1998dna,
  title={A {DNA} polymorphism discovery resource for research on human genetic variation},
  author={Collins, Francis S and Brooks, Lisa D and Chakravarti, Aravinda},
  journal={Genome research},
  volume={8},
  number={12},
  pages={1229--1231},
  year={1998},
  publisher={Cold Spring Harbor Lab}
}

@article{frazer2009human,
  title={Human genetic variation and its contribution to complex traits},
  author={Frazer, Kelly A and Murray, Sarah S and Schork, Nicholas J and Topol, Eric J},
  journal={Nature Reviews Genetics},
  volume={10},
  number={4},
  pages={241--251},
  year={2009},
  publisher={Nature Publishing Group}
}

@article{10002010map,
  title={A map of human genome variation from population-scale sequencing},
  author={{1000 Genomes Project Consortium} and others},
  journal={Nature},
  volume={467},
  number={7319},
  pages={1061--1073},
  year={2010},
  publisher={Nature Publishing Group}
}

@article{smigielski2000dbsnp,
  title={{dbSNP}: a database of single nucleotide polymorphisms},
  author={Smigielski, Elizabeth M and Sirotkin, Karl and Ward, Minghong and Sherry, Stephen T},
  journal={Nucleic Acids Research},
  volume={28},
  number={1},
  pages={352--355},
  year={2000},
  publisher={Oxford Univ Press}
}

@article{fredman2002hgvbase,
  title={{HGVbase}: a human sequence variation database emphasizing data quality and a broad spectrum of data sources},
  author={Fredman, D and Siegfried, Marianne and Yuan, Yan P. and Bork, Peer and Lehv{\"a}slaiho, Heikki and Brookes, Anthony J},
  journal={Nucleic acids research},
  volume={30},
  number={1},
  pages={387--391},
  year={2002},
  publisher={Oxford Univ Press}
}

@article{hamosh2005online,
  title={{Online Mendelian Inheritance in Man (OMIM)}, a knowledgebase of human genes and genetic disorders},
  author={Hamosh, Ada and Scott, Alan F and Amberger, Joanna S and Bocchini, Carol A and McKusick, Victor A},
  journal={Nucleic acids research},
  volume={33},
  number={suppl 1},
  pages={D514--D517},
  year={2005},
  publisher={Oxford Univ Press}
}

@article{becker2004genetic,
  title={The genetic association database},
  author={Becker, Kevin G and Barnes, Kathleen C and Bright, Tiffani J and Wang, S Alex},
  journal={Nature genetics},
  volume={36},
  number={5},
  pages={431--432},
  year={2004},
  publisher={Nature Publishing Group}
}

@article{cooper1998human,
  title={The human gene mutation database},
  author={Cooper, David N and Ball, Edward V and Krawczak, Michael},
  journal={Nucleic acids research},
  volume={26},
  number={1},
  pages={285--287},
  year={1998},
  publisher={Oxford Univ Press}
}

@article{karolchik2003ucsc,
  title={The {UCSC} genome browser database},
  author={Karolchik, Donna and Baertsch, Robert and Diekhans, Mark and Furey, Terrence S. and Hinrichs, A and Lu, YT and Roskin, Krishna M. and Schwartz, M and Sugnet, Charles W. and Thomas, Daryl J and others},
  journal={Nucleic acids research},
  volume={31},
  number={1},
  pages={51--54},
  year={2003},
  publisher={Oxford Univ Press}
}

@article{adzhubei2010method,
  title={A method and server for predicting damaging missense mutations},
  author={Adzhubei, Ivan A and Schmidt, Steffen and Peshkin, Leonid and Ramensky, Vasily E and Gerasimova, Anna and Bork, Peer and Kondrashov, Alexey S and Sunyaev, Shamil R},
  journal={Nature methods},
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\end{filecontents}
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Respuesta2

(De hecho, esto es un comentario, pero es más fácil formatearlo de esta manera)

hay una repetición

Entrada repetida---línea 208 del archivo x.bib:@article{bromberg2007snap

Probé tu árbitro faltante. ejemplo con este MWE

\documentclass{article}
\begin{document}    
\cite{altschul1997gapped}
\bibliographystyle{plain}
\bibliography{x}              %% to get x.bib
\end{document}

y funciona bien. Por favor, compruebe si esto funciona para usted.

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