Обновление пакета не удается после обновления ОС

Обновление пакета не удается после обновления ОС

При обновлении ОС до Ubuntu 16.04.6 путем запуска, do-release-upgradeпохоже, в какой-то момент произошла ошибка, поскольку пакеты больше не могут быть обновлены. Мы видим эту ошибку при запуске различных команд:

update-initramfs: Generating /boot/initrd.img-3.13.0-170-generic
sync: invalid option -- 'f'

Например: работает sudo apt-get upgrade:

$ sudo apt-get upgrade
Reading package lists... Done
Building dependency tree       
Reading state information... Done
Calculating upgrade... Done
The following packages will be REMOVED:
  linux-image-extra-3.13.0-101-generic
0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded.
3 not fully installed or removed.
After this operation, 152 MB disk space will be freed.
Do you want to continue? [Y/n] Y
(Reading database ... 39291 files and directories currently installed.)
Removing linux-image-extra-3.13.0-101-generic (3.13.0-101.148) ...
depmod: FATAL: could not load /boot/System.map-3.13.0-101-generic: No such file or directory
run-parts: executing /etc/kernel/postinst.d/apt-auto-removal 3.13.0-101-generic /boot/vmlinuz-3.13.0-101-generic
run-parts: executing /etc/kernel/postinst.d/initramfs-tools 3.13.0-101-generic /boot/vmlinuz-3.13.0-101-generic
update-initramfs: Generating /boot/initrd.img-3.13.0-101-generic
WARNING: missing /lib/modules/3.13.0-101-generic
Ensure all necessary drivers are built into the linux image!
depmod: ERROR: could not open directory /lib/modules/3.13.0-101-generic: No such file or directory
depmod: FATAL: could not search modules: No such file or directory
depmod: WARNING: could not open /var/tmp/mkinitramfs_82eRAE/lib/modules/3.13.0-101-generic/modules.order: No such file or directory
depmod: WARNING: could not open /var/tmp/mkinitramfs_82eRAE/lib/modules/3.13.0-101-generic/modules.builtin: No such file or directory
sync: invalid option -- 'f'
Try 'sync --help' for more information.
run-parts: /etc/kernel/postinst.d/initramfs-tools exited with return code 1
dpkg: error processing package linux-image-extra-3.13.0-101-generic (--remove):
 subprocess installed post-removal script returned error exit status 1
Errors were encountered while processing:
 linux-image-extra-3.13.0-101-generic
E: Sub-process /usr/bin/dpkg returned an error code (1)

Autoremove не срабатывает по той же причине:

$ sudo apt-get autoremove
Reading package lists... Done
Building dependency tree       
Reading state information... Done
The following packages will be REMOVED:
  linux-image-extra-3.13.0-101-generic
0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded.
3 not fully installed or removed.
After this operation, 152 MB disk space will be freed.
Do you want to continue? [Y/n] Y
(Reading database ... 39291 files and directories currently installed.)
Removing linux-image-extra-3.13.0-101-generic (3.13.0-101.148) ...
depmod: FATAL: could not load /boot/System.map-3.13.0-101-generic: No such file or directory
run-parts: executing /etc/kernel/postinst.d/apt-auto-removal 3.13.0-101-generic /boot/vmlinuz-3.13.0-101-generic
run-parts: executing /etc/kernel/postinst.d/initramfs-tools 3.13.0-101-generic /boot/vmlinuz-3.13.0-101-generic
update-initramfs: Generating /boot/initrd.img-3.13.0-101-generic
WARNING: missing /lib/modules/3.13.0-101-generic
Ensure all necessary drivers are built into the linux image!
depmod: ERROR: could not open directory /lib/modules/3.13.0-101-generic: No such file or directory
depmod: FATAL: could not search modules: No such file or directory
depmod: WARNING: could not open /var/tmp/mkinitramfs_6lLSTG/lib/modules/3.13.0-101-generic/modules.order: No such file or directory
depmod: WARNING: could not open /var/tmp/mkinitramfs_6lLSTG/lib/modules/3.13.0-101-generic/modules.builtin: No such file or directory
sync: invalid option -- 'f'
Try 'sync --help' for more information.
run-parts: /etc/kernel/postinst.d/initramfs-tools exited with return code 1
dpkg: error processing package linux-image-extra-3.13.0-101-generic (--remove):
 subprocess installed post-removal script returned error exit status 1
Errors were encountered while processing:
 linux-image-extra-3.13.0-101-generic
E: Sub-process /usr/bin/dpkg returned an error code (1)

и у dpkg тоже есть проблема:

$ sudo dpkg --configure -a
Setting up linux-firmware (1.157.21) ...
update-initramfs: Generating /boot/initrd.img-3.13.0-170-generic
sync: invalid option -- 'f'
Try 'sync --help' for more information.
dpkg: error processing package linux-firmware (--configure):
 subprocess installed post-installation script returned error exit status 1
Errors were encountered while processing:
 linux-firmware

Место на диске, кажется, в порядке:

$ df -h
Filesystem      Size  Used Avail Use% Mounted on
udev            388M  4.0K  388M   1% /dev
tmpfs            81M  532K   81M   1% /run
/dev/xvda1      8.8G  4.7G  3.6G  57% /
none            4.0K     0  4.0K   0% /sys/fs/cgroup
none            5.0M     0  5.0M   0% /run/lock
none            404M     0  404M   0% /run/shm
none            100M     0  100M   0% /run/user
cgmfs           100K     0  100K   0% /run/cgmanager/fs
tmpfs            81M     0   81M   0% /run/user/1000

Чистота сделала свое дело:

$ sudo apt-get autoclean
Reading package lists... Done
Building dependency tree       
Reading state information... Done

ОС - это

$ cat /etc/os-release
NAME="Ubuntu"
VERSION="16.04.6 LTS (Xenial Xerus)"

Это повреждение ядра? Какие шаги можно предпринять, чтобы спасти сервер?

Обновлять

Как и предполагалось, я запустил тест sudo dpkg --remove --force-remove-reinstreq linux-image-extra-3.13.0-101-genericи получил следующие результаты:

$ sudo dpkg --remove --force-remove-reinstreq linux-image-extra-3.13.0-101-generic
(Reading database ... 39291 files and directories currently installed.)
Removing linux-image-extra-3.13.0-101-generic (3.13.0-101.148) ...
depmod: FATAL: could not load /boot/System.map-3.13.0-101-generic: No such file or directory
run-parts: executing /etc/kernel/postinst.d/apt-auto-removal 3.13.0-101-generic /boot/vmlinuz-3.13.0-101-generic
run-parts: executing /etc/kernel/postinst.d/initramfs-tools 3.13.0-101-generic /boot/vmlinuz-3.13.0-101-generic
update-initramfs: Generating /boot/initrd.img-3.13.0-101-generic
WARNING: missing /lib/modules/3.13.0-101-generic
Ensure all necessary drivers are built into the linux image!
depmod: ERROR: could not open directory /lib/modules/3.13.0-101-generic: No such file or directory
depmod: FATAL: could not search modules: No such file or directory
depmod: WARNING: could not open /var/tmp/mkinitramfs_9Tbcam/lib/modules/3.13.0-101-generic/modules.order: No such file or directory
depmod: WARNING: could not open /var/tmp/mkinitramfs_9Tbcam/lib/modules/3.13.0-101-generic/modules.builtin: No such file or directory
sync: invalid option -- 'f'
Try 'sync --help' for more information.
run-parts: /etc/kernel/postinst.d/initramfs-tools exited with return code 1
dpkg: error processing package linux-image-extra-3.13.0-101-generic (--remove):
 subprocess installed post-removal script returned error exit status 1
Errors were encountered while processing:
 linux-image-extra-3.13.0-101-generic

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